CDS

Accession Number TCMCG042C56762
gbkey CDS
Protein Id XP_016488898.1
Location complement(join(52159..52385,52466..52688,53001..53551,53733..54060,54733..54825,55529..55614,56481..56536,56646..56911,57049..57134,57244..57292,57380..57446,58944..59059,59176..59242,60255..60343,61295..61495))
Gene LOC107808849
GeneID 107808849
Organism Nicotiana tabacum

Protein

Length 834aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016633412.1
Definition PREDICTED: tRNA (cytosine(34)-C(5))-methyltransferase-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category J
Description 16S rRNA methyltransferase RsmB/F
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K15334        [VIEW IN KEGG]
EC 2.1.1.202        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008175        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016427        [VIEW IN EMBL-EBI]
GO:0016428        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTTTCAGAGGAAGAAGGTCAAGAACTCAGAGAAAGCACTTCGTTCAAAGCAGAGAAAACAATTGGAAAAACAGCAGCGAAAATGTTGGTTCTGATGAGCAACAACAAAATGCTGCTACCACTGATAATAGAGAAAACAGTAACCCTACTTGGAAACGGTTTGCCACCCAAAACCTTGCATTTGATGAATATTACAAGGAGCAAGAAATTGTGCCACCAGAAGAGTGGAATACTTTTATGGACTGTCTTCGAAGTCCATTGCCTGCTGCTTTCAGGATCAATTCAAGTAGCCAATGCTACTTGGAAATTCTATCCAAGTTGGAGAATGATTTTATGAAGTCTCTACAGGAAGAGGGGACAGATGGGAGTGAGGTTGAGGCAATAAGGCCATTGCCCTGGTATCCAGAGAATCTTGCCTGGCAGTCAAATTTTTCTCGCCAGCAGTTGAGGAAAAACCAAATACTTGGGAGGTTCCATGAGTTCTTGAAGCTACAAAATGAAATTGGTAACATTACGAGACAGGAGGCTGTCAGCATGGTTCCTCCTCTGTTCCTGGATGTACGACCCGATGATTTCGTTCTTGACATGTGTGCAGCTCCTGGTTCAAAAACGTTTCAGTTACTTGAAATGATACACCACTCAGCTGAACCTGGATCATTACCCGGTGGAATGGTCTTAGCGAATGATGCTGATGTTCAAAGGTGTAATCTTCTCATTCACCAAACAAAGAGAATGTCCACTGCCAACTTGATAGTCACGAATCATGAAGCACAGCACTTTCCTAGCTGTCATTTGAATAGAAGTTATGCAAAAGGTTCTGAGCCTCGAGAAGCAAAGGAACTTGATATTGATCAACTTCTATTTGATCGTGTCTTGTGTGATGTTCCATGTAGTGGTGATGGCACTTTACGCAAGGCTCCTGATATATGGAGGAGATGGAATTCAGGAATGGGTAATGGTCTACATGGGCTACAGATTCAGATAGCAATGCGAGGTATGTCTTTGCTTAAAGTTGGTGGAAGGATGGTTTATTCAACTTGCTCAATGAATCCCATTGAGAATGAGGCTGTGGTTGCCGAGATTTTAAGGAGGTGTGGGGGATCTGTTGAACTCGTTGATGTTTCCAGTGAACTTCCTCAGCTTGTTAGAAGGCCAGGTCTGAAAAAATGGAAGGTTAAAGATAAAGGAATGTGGTTGATTTCTTACCAAGAAGTTAGTAATTCTCGCAGAGCTGCAGTTGTTCCTGGAATGTTCCCCTCTGGCAAAGCCTTTGTGGATGCACCTGATGATGATGCGAGTAGAAGTCAATTGCCTGATAATGGGAGTAATAGTAACTCTCAAAATGGTATTGCGGTGGTGCAGGATCCTGCAACTCAAACTACAATCTTGGATGAGGAAGCTTCAAATTTGCCATTGGAACGTTGTATGAGGATAGTGCCACATGATCAGAACACTGGAGCCTTCTTTATTGCTGTCTTTCACAAGCTTTCTCCTTTGCCAGTCATACAGAAGAAGCTTTTCGGTCAGCCAGGGAAGACGACTTCCAGAGGCAATTTCCAAGCACAAACTTTTACTGAGTTCAAAGATATTAATGCTGATGAAGTTGAGCAAGTGGATTCTGTAGGTAACCAGCTATCTGAAGCAACTATGGATGATGATGATATACTTGAAAACGCAAAGGATGAAGCTCCACTGGATACTGACCCCAATAAAATAGTGGACGAAAAGAGGCCGGAGCAGATTGAACCTTCCGATGATGGAAGATCTGGCCCCGAGTTGGATAGAGGGAAAAGGAAGTTACAAATGCAAGGAAAATGGAGAGGGATTGACCCAGTAATATTTTACCAGGAGGAGGCAGTTGTGGGTCAGATAAAGGCTTTCTATGGCATCAAAGAATCCTTTCTATTCAAAGGTCATTTGATTGTAAGGAATATTAATATCAACCATGTGAAGAGAGTTTATTATGTATCTAAATCTGTGAAAGAAGTTCTCGAACTCAATTTTTTAGCTGGTCAGCAGCTCAAGATAGCTGCCATTGGGCTCAAGATGTTTGAGCGACAAAAATCGAAAGATGCTGGTGCATTCCGCATAACATCTGAAGGGTTGCCATTGCTGTTGCCACATATAACCAAACAAATACTGTATGCATCTCCGGTAGATTTCAAACATCTTTTGCAGCACAAGAGCGTTAAATTTGGCGATTTTGAGGACACTGAATTTCGGGAAAACGCTTCAAAGCTGCAATTTGGTTGTTGTGTGGTGGTTTTGAATAAAGACAATAAAACCTTGTCAGAACCTCAAGTGGATGCATCAACTGTCGCTATAGGATGCTGGAGAGGCCGGAATAGTATCACAGTGATGGTGACTGAACTTGATATCCAAGAACTCCTAGAGAGGATGTTGATGTATATGGAGGAGAATGCAGATAACAAGCCATTGACTGCTGAGGCAGATAAAATAGTTAAAGCAGATGAAGCTGAATTGAATATATCATTATATTGA
Protein:  
MGFRGRRSRTQRKHFVQSRENNWKNSSENVGSDEQQQNAATTDNRENSNPTWKRFATQNLAFDEYYKEQEIVPPEEWNTFMDCLRSPLPAAFRINSSSQCYLEILSKLENDFMKSLQEEGTDGSEVEAIRPLPWYPENLAWQSNFSRQQLRKNQILGRFHEFLKLQNEIGNITRQEAVSMVPPLFLDVRPDDFVLDMCAAPGSKTFQLLEMIHHSAEPGSLPGGMVLANDADVQRCNLLIHQTKRMSTANLIVTNHEAQHFPSCHLNRSYAKGSEPREAKELDIDQLLFDRVLCDVPCSGDGTLRKAPDIWRRWNSGMGNGLHGLQIQIAMRGMSLLKVGGRMVYSTCSMNPIENEAVVAEILRRCGGSVELVDVSSELPQLVRRPGLKKWKVKDKGMWLISYQEVSNSRRAAVVPGMFPSGKAFVDAPDDDASRSQLPDNGSNSNSQNGIAVVQDPATQTTILDEEASNLPLERCMRIVPHDQNTGAFFIAVFHKLSPLPVIQKKLFGQPGKTTSRGNFQAQTFTEFKDINADEVEQVDSVGNQLSEATMDDDDILENAKDEAPLDTDPNKIVDEKRPEQIEPSDDGRSGPELDRGKRKLQMQGKWRGIDPVIFYQEEAVVGQIKAFYGIKESFLFKGHLIVRNININHVKRVYYVSKSVKEVLELNFLAGQQLKIAAIGLKMFERQKSKDAGAFRITSEGLPLLLPHITKQILYASPVDFKHLLQHKSVKFGDFEDTEFRENASKLQFGCCVVVLNKDNKTLSEPQVDASTVAIGCWRGRNSITVMVTELDIQELLERMLMYMEENADNKPLTAEADKIVKADEAELNISLY